BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A12SP1|AL425221
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1881 0.0
>3x_Contig1804
Length = 51183
Score = 1881 bits (945), Expect = 0.0
Identities = 954/961 (99%)
Strand = Plus / Plus
Query: 1 atttccataaaatgacgttctagaaatgtggatatatgcmgttgaaaagaacagagcttt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 43501 atttccataaaatgacgttctagaaatgtggatatatgcagttgaaaagaacagagcttt 43560
Query: 61 gggtaaatttgtagaaattgacgaacgatttacagaatgatagttgctccatcccaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43561 gggtaaatttgtagaaattgacgaacgatttacagaatgatagttgctccatcccaaaat 43620
Query: 121 tatacactcctactaaaggtaactcatagtgggtagataaatcttttgttttcaaaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43621 tatacactcctactaaaggtaactcatagtgggtagataaatcttttgttttcaaaatcg 43680
Query: 181 gtaagatctagcatggctagattaactctttcgttgactccttctgtgaaagaaacaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43681 gtaagatctagcatggctagattaactctttcgttgactccttctgtgaaagaaacaata 43740
Query: 241 ccaaagttgtcttctggatgttcttgaacccattgatacctttctttgttccttttcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43741 ccaaagttgtcttctggatgttcttgaacccattgatacctttctttgttccttttcgcc 43800
Query: 301 aaaatgtatctgattgttaacaaaataacaatattaaggragaatgavaccacaatttga 360
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 43801 aaaatgtatctgattgttaacaaaataacaatattaaggaagaatgaaaccacaatttga 43860
Query: 361 ataatccaggatggatagtatcttggggcatcctttggattccagagttgaggagaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43861 ataatccaggatggatagtatcttggggcatcctttggattccagagttgaggagaaatg 43920
Query: 421 atgtttgcvgcgccatatgccaacataaacattacgttcctgtagagtttcttggtataa 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43921 atgtttgcagcgccatatgccaacataaacattacgttcctgtagagtttcttggtataa 43980
Query: 481 ccggctgcagatgatgtcgtccatcccaaagcaataatgtatgtgataccctttgaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43981 ccggctgcagatgatgtcgtccatcccaaagcaataatgtatgtgataccctttgaggag 44040
Query: 541 ccggctaagatcatacaggctaacaacgcatatttgttggaccaatctattgtvaccatc 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 44041 ccggctaagatcatacacgctaacaacgcatatttgttggaccaatctattgtaaccatc 44100
Query: 601 gcaatactggacgcaattggtagaatcagacaaccggctgcaatataaccactttgattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44101 gcaatactggacgcaattggtagaatcagacaaccggctgcaatataaccactttgattt 44160
Query: 661 ggatagttgaggataacaaaagcgaatatcaagtacagtagaatgtcccaaacactccca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44161 ggatagttgaggataacaaaagcgaatatcaagtacagtagaatgtcccaaacactccca 44220
Query: 721 gccgcagaaaccaatgaagatcctaggttgtcgacaccgatatcaacatacaattggttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44221 gccgcagaaaccaatgaagatcctaggttgtcgacaccgatatcaacatacaattggttc 44280
Query: 781 tgttggtatgtcaatgaatttgacagcataagagtaaaactttggaaaaagaacaaccat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44281 tgttggtatgtcaatgaatttgacagcataagagtaaaactttggaaaaagaacaaccat 44340
Query: 841 gaaactggatctttgaatgtttcataaatttgatattttttgattgtcttctgttcaatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44341 gaaactggatctttgaatgtttcataaatttgatattttttgattgtcttctgttcaatt 44400
Query: 901 gatgattccgttgaccgttgcacttgctttataagatagactttttcttttgttgacara 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 44401 gatgattccgttgaccgttgcacttgctttataagatagactttttcttttgttgacaga 44460
Query: 961 a 961
|
Sbjct: 44461 a 44461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8331
Number of Sequences: 1807
Number of extensions: 8331
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)